Installation instructions for building the bioinformatics apps in Impilo
As its first goal, Impilo provides on a single server the largest number of bioinformatics applications while also providing the most pertinent documentation on their uses for teaching and academic purposes.
Pairwise alignments
Multiple alignments
Phylogeny - Analysis
Phylogeny - Tree viewers and editors
Gene annotation tools
Nucleic acid structural analysis
Transcriptomics
Integrative biology
Molecular modelling
- JChemPaint
10.04 A10 update
- Jmol
10.04 A10 update
- Pymol
10.04 A10 update
Scientific Imagery
- ImageJ
10.04 A10 update
Biostatistics and calculation
- R
10.04 A10 update
- Bioconductor
10.04 A10 update
General purpose applications
- Artemis
10.04 A10 update
- EMBOSS / EMBASSY / Jemboss
10.04 A10 update
- Readseq
10.04 A10 update
Primer design and management
- Primer3
10.04 A10 update
High throughput sequencing
- InGAP
10.04 A10 removed
- MIRA 3
10.04 A10 update
- SAMtools
10.04 A10 update
- Staden package
10.04 A10 addition