====== Installation of MUSCLE 3.7 ======

===== Additional libraries =====

No additional library is required.

===== Procedure =====

This is the procedure to follow to install MUSCLE from source code:

  * The archive with the source code is downloaded from its web location in ''/home/bioubuntu'', decompressed and the created folder os moved into ''/opt/bio/sources''.

  * This folder should belong to ''root'' and its permissions set to ''755''.

<code bash>
% sudo chown -R root:root /opt/bio/sources/muscle3.7_src
% sudo chmod 755 /opt/bio/sources/muscle3.7_src
</code>

  * Once you are in ''/opt/bio/sources/muscle3.7_src'', compilation is easily done:

<code bash>
% sudo make
</code>

  * To make the application available to everyone:

<code bash>
% sudo ln -s /opt/bio/sources/muscle3.7_src/muscle /usr/local/bin/muscle
</code>