====== Installation of MAFFT 6.707 ======

===== Additional libraries =====

No additional library is required.

===== Procedure =====

Follow this procedure to install MAFFT from its source code:

  * The archive with the soource code is downloaded from its web site in ''/home/bioubuntu'', decompressed and the created folder is moved into ''/opt/bio/sources''.

  * This folder should belong to ''root'' and its permissions set to ''755''.

<code bash>
% sudo chown -R root:root /opt/bio/sources/mafft-6.707-with-extensions
% sudo chmod 755 /opt/bio/sources/mafft-6.707-with-extensions
</code>

  * Once you are in ''mafft-6.707-with-extensions'', compilation is a 2-step process:

<code bash>
% cd extensions
% sudo make && sudo make install
% cd ../core
% sudo make && sudo make install
</code>

  * The applications are now available!