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====== Installation of JChemPaint 3.1.0 ======

===== Additional libraries =====

Java, already installed.

===== Procedure =====

Here is the procedure to install JChemPaint:

  * JChemPaint is distributed as a JAR archive, ready to execute. Create a folder under ''/home/bioubuntu'' to put the archive in and move this folder to ''/opt/bio/sources''.

  * This folder should belong to ''root'' and its permissions set to ''755''.

<code bash>
% sudo chown -R root:root /opt/bio/sources/jchempaint
% sudo chmod 755 /opt/bio/sources/jchempaint
</code>

  * Once you are in ''/opt/bio/sources/jchempaint'', create a small startup script to failitate the job:
<code bash>
% sudo nano runJCP
</code>

  * Put this code in it:
<code>
#!/bin/sh
java -jar /opt/bio/sources/jchempaint/jchempaint-3.1.jar
</code>

  * You need to make this script executable and available to all:
<code bash>
% sudo chmod ugo+x runJCD
% sudo ln -s /opt/bio/sources/jchempaint/runJCP /usr/local/bin/runJCP
</code>

  * To add JChemPaint to the Impilo application menu, you need to edit the Xfce4 configuration file:
<code>
% sudo xfce4-menueditor /etc/xdg/xfce4/desktop/menu.xml
</code>

  * The three items to add are:
    * Item: Launcher
    * Name: JChemPaint
    * Command: runJCP