This page is read only. You can view the source, but not change it. Ask your administrator if you think this is wrong. ====== Installation of Jalview 2.4 ====== ===== Additional libraries ===== Java, which is already installed. ===== Procedure ===== Here is the procedure to install Jalview: * Jalview is distributed as a binary installer. Create a folder in ''/home/bioubuntu'' to put ut in and move it to ''/opt/bio/sources''. * This folder should belong to ''root'' and its permissions set to ''755''. <code bash> % sudo chown -R root:root /opt/bio/sources/jalview % sudo chmod 755 /opt/bio/sources/jalview </code> * Once you are in ''/opt/bio/sources/jalview'', you need to be able to launch the installer: <code bash> % sudo chmod u+x install.bin % sudo ./install.bin </code> * Let the installer do its stuff with default settings **except** that the install location is set from ''/root/Jalview'' to ''/opt/bio/sources/jalview''. * Let's make the application available to everyone: <code bash> % sudo ln -s /opt/bio/sources/jalview/Jalview /usr/local/bin/jalview </code> * To add Jalview in the Impilo application menu, you need to modify the Xfce4 configuration file: <code> % sudo xfce4-menueditor /etc/xdg/xfce4/desktop/menu.xml </code> * The three things to add are : * Item: Launcher * Name: Jalview * Command: jalview